padj=0.05
logFC=1
files=c("GSE126209","GSE28425_","GSE9508_","GSE99671_")
upList=list()
downList=list()
allFCList=list()
for(i in 1:length(files)){
inputFile=files[i]
rt=read.table(inputFile,header=T,sep = '\t',quote = '') # 注意文件读取
header=unlist(strsplit(inputFile,"_"))
downList[[header[1]]]=as.vector(rt[,1])
upList[[header[1]]]=rev(as.vector(rt[,1]))
fcCol=rt[,1:2]
colnames(fcCol)=c("Gene",header[[1]])
allFCList[[header[1]]]=fcCol
}
padj=0.05
logFC=1
files=c("GSE28425,GSE99671,GSE9508")
Error in file(file, "rt") : cannot open the connection
In addition: Warning message:
In file(file, "rt") :
cannot open file 'GSE126209': No such file or directory
