GSEA这个报错是什么情况呀,我的数据导入没有报错,这里没看懂,可不可以帮忙解释一下,谢谢啦!
{zip_report=false, num=100, scoring_scheme=classic, norm=meandiv, out=D:\360Downloads\GSEA\task from LiuYu, mode=Max_probe, include_only_symbols=true, set_max=100, gmx=ftp.broadinstitute.org://pub/gsea/gene_sets/c7.all.v7.5.1.symbols.gmt, plot_top_x=20, nperm=1000, order=descending, rnd_seed=timestamp, rpt_label=taskfromL.Y, set_min=0, res=D:\360Downloads\GSEA\task from LiuYu\task23384.gct, create_svgs=false, cls=D:\360Downloads\GSEA\task from LiuYu\taskgroup.cls#c_versus_P, sort=real, create_gcts=false, save_rnd_lists=false, median=false, metric=Signal2Noise, make_sets=true, rnd_type=no_balance, gui=false, permute=gene_set, collapse=No_Collapse}
of elements = 1
D:\360Downloads\GSEA\task from LiuYu\taskgroup.cls#c_versus_P
[1652601114365] [INFO] No dataset collapsing was done .. using original as is
to parse>ftp.broadinstitute.org://pub/gsea/gene_sets/c7.all.v7.5.1.symbols.gmt< got: [ftp.broadinstitute.org://pub/gsea/gene_sets/c7.all.v7.5.1.symbols.gmt]
[1652601114372] [INFO] Extracting ds: task23384 by template: taskgroup.cls#c_versus_P
[1652601114374] [INFO] Timestamp used as random seed: 1652601114364
[1652601114464] [INFO] Got gsets: 5219 now preprocessing them ... min: 0 max: 100
Done removeGeneSetsSmallerThan: 0 for: 501 / 5219
Done removeGeneSetsSmallerThan: 0 for: 1001 / 5219
Done removeGeneSetsSmallerThan: 0 for: 1501 / 5219
Done removeGeneSetsSmallerThan: 0 for: 2001 / 5219
Done removeGeneSetsSmallerThan: 0 for: 2501 / 5219
Done removeGeneSetsSmallerThan: 0 for: 3001 / 5219
Done removeGeneSetsSmallerThan: 0 for: 3501 / 5219
Done removeGeneSetsSmallerThan: 0 for: 4001 / 5219
Done removeGeneSetsSmallerThan: 0 for: 4501 / 5219
Done removeGeneSetsSmallerThan: 0 for: 5001 / 5219
[1652601114558] [INFO] Done preproc for smaller than: 0
Done removeGeneSetsLargerThan 501 / 5219
Done removeGeneSetsLargerThan 1001 / 5219
Done removeGeneSetsLargerThan 1501 / 5219
Done removeGeneSetsLargerThan 2001 / 5219
Done removeGeneSetsLargerThan 2501 / 5219
Done removeGeneSetsLargerThan 3001 / 5219
Done removeGeneSetsLargerThan 3501 / 5219
Done removeGeneSetsLargerThan 4001 / 5219
Done removeGeneSetsLargerThan 4501 / 5219
Done removeGeneSetsLargerThan 5001 / 5219
[1652601116087] [INFO] Done preproc for larger than: 100
[1652601116087] [INFO] Finished permutations ... creating reports
[1652601116087] [SEVERE] Tool exec error
[1652601116111] [INFO] Renaming rpt dir on error to: D:\360Downloads\GSEA\task from LiuYu\error_taskfromL.Y.Gsea.1652601114364
[1652601249369] [SEVERE] Tool execution error