emapper.py报错
nohup emapper.py -m diamond --no_annot --no_file_comments --data_dir db/eggnog \
> --cpu 18 -i meta/result/NR/protein.fa -o meta/temp/eggnog/protein.fa --override &>diamond比对.log &
报错
nohup: ignoring input
Traceback (most recent call last):
File "/gdata01/user/zhanggh/miniconda3/bin/emapper.py", line 652, in <module>
args = parse_args(parser)
File "/gdata01/user/zhanggh/miniconda3/bin/emapper.py", line 482, in parse_args
args.call_info = get_call_info()
File "/gdata01/user/zhanggh/miniconda3/lib/python3.10/site-packages/eggnogmapper/common.py", line 86, in get_call_info
text.append('## ' + get_version())
File "/gdata01/user/zhanggh/miniconda3/lib/python3.10/site-packages/eggnogmapper/common.py", line 131, in get_version
p = Popen(["git", "describe", "--tags"], stdout=PIPE, stderr=PIPE, cwd=BASE_PATH)
File "/gdata01/user/zhanggh/miniconda3/lib/python3.10/subprocess.py", line 971, in __init__
self._execute_child(args, executable, preexec_fn, close_fds,
File "/gdata01/user/zhanggh/miniconda3/lib/python3.10/subprocess.py", line 1847, in _execute_child
raise child_exception_type(errno_num, err_msg, err_filename)
PermissionError: [Errno 13] Permission denied: 'git'