不谷尉 2023-01-21 19:52 采纳率: 0%
浏览 91
已结题

CellphoneDB将数据结果绘图报错Fatal error: unable to initialize the JIT

问题遇到的现象和发生背景

CellphoneDB画图失败,在用代码进行分析得出结果之后需要进行绘图,但是使用代码绘图一直报错

遇到的现象和发生背景,请写出第一个错误信息

输入代码之后会弹出窗口:
Fatal error: unable to initialize the JIT
同时命令行中的报错信息如下:

(cellphonedb_new) PS C:\Users\rzjiang\Desktop\test> cellphonedb plot dot_plot --pvalues-path test/pvalues.txt --output-path test_output  --output-name test.dotplot.pdf
Error in glue(.Internal(R.home()), "library", "base", "R", "base", sep = .Platform$file.sep) :
  4 arguments passed to .Internal(paste) which requires 3
Error: could not find function "attach"
Error: could not find function "options"
Error: object '.ArgsEnv' not found

在安装glue后,出现新的报错

ImportError: DLL load failed: 找不到指定的程序。

按照网上的说法将h5py卸载重装后会出现不兼容的情况,然后在将各个包卸载重新安装后再次报错最开始的
不兼容报错:

ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts.
glue-core 1.2.2 requires h5py>=2.10, but you have h5py 2.9.0 which is incompatible.
cellphonedb 3.1.0 requires click<8.0,>=7.0, but you have click 8.0.4 which is incompatible.
cellphonedb 3.1.0 requires numpy<=1.19.5,>=1.16.5, but you have numpy 1.21.5 which is incompatible.
cellphonedb 3.1.0 requires pandas<=1.1.4,>=1.0.0, but you have pandas 1.3.5 which is incompatible.
cellphonedb 3.1.0 requires PyYAML<6.0,>=5.4, but you have pyyaml 6.0 which is incompatible.
anndata 0.7.8 requires xlrd<2.0, but you have xlrd 2.0.1 which is incompatible.
  • 写回答

0条回答 默认 最新

    报告相同问题?

    问题事件

    • 系统已结题 1月29日
    • 创建了问题 1月21日

    悬赏问题

    • ¥15 drone 推送镜像时候 purge: true 推送完毕后没有删除对应的镜像,手动拷贝到服务器执行结果正确在样才能让指令自动执行成功删除对应镜像,如何解决?
    • ¥15 求daily translation(DT)偏差订正方法的代码
    • ¥15 js调用html页面需要隐藏某个按钮
    • ¥15 ads仿真结果在圆图上是怎么读数的
    • ¥20 Cotex M3的调试和程序执行方式是什么样的?
    • ¥20 java项目连接sqlserver时报ssl相关错误
    • ¥15 一道python难题3
    • ¥15 牛顿斯科特系数表表示
    • ¥15 arduino 步进电机
    • ¥20 程序进入HardFault_Handler