已经设置了工作目录,但是一直报错说找不到文件,求解答
setwd("C:/Users/yilimu/Desktop/167CFRG/04.symbol")
> for (i in 1:600) {
+ path=paste0('gdc_download_20230227_065147.627413',count_file[i])
+ data<-read.delim(path,fill = TRUE,header = FALSE,row.names = 1)
+ colnames(data)<data[2,]
+ data<-data[-c(1:6),]
+ data<-data[3]
+ colnames(data)<-file_samples$sample_id(which(file_samples$file_name==count_file_name[i]))
+ matrix<-cbind(matrix,data)
+
+ }
Error in file(file, "rt") : cannot open the connection
In addition: Warning message:
In file(file, "rt") :
cannot open file 'gdc_download_20230227_065147.6274130052ae83-7ae5-470a-a125-5cd94a9fa9e9/a6a6b9c6-9db7-42b3-a09f-770b7e126fbb.rna_seq.augmented_star_gene_counts.tsv': No such file or directory